CDS

Accession Number TCMCG016C19533
gbkey CDS
Protein Id OMO67203.1
Location complement(join(7016..7165,7369..7605,7692..7777,7990..8050,8179..8206,8290..8416,9272..9311,9411..9474,9589..9644,9759..9797))
Organism Corchorus capsularis
locus_tag CCACVL1_20709

Protein

Length 295aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01012440.1
Definition RNA polymerase III Rpc4 [Corchorus capsularis]
Locus_tag CCACVL1_20709

EGGNOG-MAPPER Annotation

COG_category K
Description RNA polymerase III
KEGG_TC -
KEGG_Module M00181        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03026        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04623        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04623        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001819        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032481        [VIEW IN EMBL-EBI]
GO:0032648        [VIEW IN EMBL-EBI]
GO:0032728        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAACAAAAAGACAGCAAACCCAATGTCGCCAGGAAGATGAGATTTGCACCAAAAGCTCCTCCACGCCGAGCAGTAAAGCAGGAGGTTAAAACGGAAGAGGTTGAGGAAACTGATGCTGCTCAAGCCAGGGATTTGCTGCAGCGTTTCAATGTGCATCAAGCTTCTATGAGAACAAAGCCTAAATTTGAAAAGAAAGTTGCACCTTCACAAGTTGCAATTGGTCATGGAGGAGGATCAGCTTCAATAAGATCATTTGGTTTTTCAAAAGGTGCAAGTCATAGTAGCAGAGAAACTTTTAATGGTATGCTATCCTTAAATAAGAAAGAGGAAAAAGAATACAAAGAACCATGGGATTATTACAGTTATTATCCTGTAACCCTTCCTGTGAGGAGACCGTATGCTGGGAATCCAGCGCTTCTTGATGAGGAGGAATTTGCTTCAGAGAATAATACTTTTGATGAAAGTTCAGATCAGCCGGCAACAGAGCTTGGTCTAATGGAGGAGAATCTGGAACCAAGTATGTTCTTTATTCAGTTACCACCAACATTACCCGTGATAAAGCAATCAGGCAGCGCAGCTGGGAGTGAGGTTGCTAGCAGCTCAAAGTCAGCTGCAAGTGTAGGTTCTTCAAAGGAGTCAAATGGCTTAGAAGAGTTACCTGCCGGTCATATGGGTAAAATGCTAGTGTATAAAAGTGGAGCTGTCAAGTTGAAGTTAGGGGATACCATTTATGATGTTACTCCAGGTTTGAATTGCGTAATTGCGCAGGATGTTGTAGCTATTAATACTGCAGAGAAGCAGTGTTGTGTTGTAGGGGAGCTCAACAAGCGTGCGGTTTTAACCCCAGATATCACTTCTATTTTGAATAGTTTGCCTGATCTTTGA
Protein:  
MEQKDSKPNVARKMRFAPKAPPRRAVKQEVKTEEVEETDAAQARDLLQRFNVHQASMRTKPKFEKKVAPSQVAIGHGGGSASIRSFGFSKGASHSSRETFNGMLSLNKKEEKEYKEPWDYYSYYPVTLPVRRPYAGNPALLDEEEFASENNTFDESSDQPATELGLMEENLEPSMFFIQLPPTLPVIKQSGSAAGSEVASSSKSAASVGSSKESNGLEELPAGHMGKMLVYKSGAVKLKLGDTIYDVTPGLNCVIAQDVVAINTAEKQCCVVGELNKRAVLTPDITSILNSLPDL